Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 RN7SL767P-201ENST00000493013 295 ntBASIC14.54□□□□□ -0.08
CLDN23Q96B33 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 AC140658.4-201ENST00000561990 352 ntBASIC14.54□□□□□ -0.08
CLDN23Q96B33 AP005264.6-204ENST00000588436 719 ntBASIC14.54□□□□□ -0.08
CLDN23Q96B33 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 AL133467.4-201ENST00000602953 725 ntBASIC14.54□□□□□ -0.08
CLDN23Q96B33 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 HMGB1P24-201ENST00000611897 328 ntBASIC14.54□□□□□ -0.08
CLDN23Q96B33 ST5-261ENST00000626808 1071 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 CASP16P-204ENST00000635032 809 ntBASIC14.54□□□□□ -0.08
CLDN23Q96B33 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN23Q96B33 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 KHSRPP1-201ENST00000427983 1768 ntBASIC14.54□□□□□ -0.08
CLDN23Q96B33 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLDN23Q96B33 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.53□□□□□ -0.08
CLDN23Q96B33 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 RNVU1-8-201ENST00000364272 125 ntBASIC14.53□□□□□ -0.08
CLDN23Q96B33 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 MIR566-201ENST00000385187 94 ntBASIC14.53□□□□□ -0.08
CLDN23Q96B33 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 RN7SL582P-201ENST00000491078 279 ntBASIC14.53□□□□□ -0.08
CLDN23Q96B33 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AC006483.2-201ENST00000609813 515 ntBASIC14.53□□□□□ -0.08
CLDN23Q96B33 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AL118508.1-201ENST00000613502 2345 ntBASIC14.53□□□□□ -0.08
CLDN23Q96B33 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN23Q96B33 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN23Q96B33 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CLDN23Q96B33 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.52□□□□□ -0.08
CLDN23Q96B33 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN23Q96B33 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms