Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 TEKT4P2-202ENST00000559466 1312 ntBASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 PCDHA1-201ENST00000378133 2726 ntBASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCSK9Q8NBP7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 RN7SL277P-201ENST00000481521 288 ntBASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 RPL18AP8-201ENST00000486071 528 ntBASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 RNA5SP417-201ENST00000516459 108 ntBASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 AP002353.1-201ENST00000528257 1599 ntBASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCSK9Q8NBP7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCSK9Q8NBP7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 AL357563.1-201ENST00000404728 395 ntBASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 ERP29P1-201ENST00000442902 706 ntBASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 AC084752.1-201ENST00000509766 622 ntBASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 MIR4472-1-201ENST00000584349 80 ntBASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 IL9RP3-201ENST00000442856 1674 ntBASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.14■□□□□ 0.17
PCSK9Q8NBP7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms