Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AP000356.3-201ENST00000382243 753 ntBASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 KRT18P36-201ENST00000411618 1276 ntBASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 RPS9P1-201ENST00000419943 583 ntBASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 XBP1P1-201ENST00000436573 652 ntBASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 MIR6842-201ENST00000612539 65 ntBASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AC092299.1-201ENST00000632679 757 ntBASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS3Q8IXF0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 PKD1P5-201ENST00000532415 10291 ntBASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 AC144831.1-201ENST00000573312 2656 ntBASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 TMBIM7P-202ENST00000641474 1516 ntBASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS3Q8IXF0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 WASH3P-207ENST00000560956 1394 ntBASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 PPT1-215ENST00000641471 2368 ntBASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 PGAM1P5-201ENST00000548011 764 ntBASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 AC013268.4-201ENST00000637413 2228 ntBASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS3Q8IXF0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms