Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC27Q2M243 AC152010.1-201ENST00000415779 2006 ntBASIC19.18■□□□□ 0.66
CCDC27Q2M243 AC011498.7-201ENST00000624986 2027 ntBASIC19.18■□□□□ 0.66
CCDC27Q2M243 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 AC012441.2-201ENST00000444843 739 ntBASIC19.18■□□□□ 0.66
CCDC27Q2M243 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 MIR6752-201ENST00000618442 71 ntBASIC19.18■□□□□ 0.66
CCDC27Q2M243 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 REXO1L6P-201ENST00000603433 1515 ntBASIC19.18■□□□□ 0.66
CCDC27Q2M243 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 AC068418.2-201ENST00000577309 3703 ntBASIC19.18■□□□□ 0.66
CCDC27Q2M243 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC27Q2M243 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC27Q2M243 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 HPD-204ENST00000543163 1709 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.17■□□□□ 0.66
CCDC27Q2M243 BTBD6P1-201ENST00000412176 1267 ntBASIC19.17■□□□□ 0.66
CCDC27Q2M243 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AC005730.2-201ENST00000564549 1184 ntBASIC19.17■□□□□ 0.66
CCDC27Q2M243 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AL008721.1-201ENST00000609964 604 ntBASIC19.17■□□□□ 0.66
CCDC27Q2M243 AC022748.3-201ENST00000621828 275 ntBASIC19.17■□□□□ 0.66
CCDC27Q2M243 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AL008718.2-201ENST00000609206 1313 ntBASIC19.17■□□□□ 0.66
CCDC27Q2M243 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC27Q2M243 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC27Q2M243 AL513477.1-201ENST00000602865 2407 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC27Q2M243 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 POM121L10P-201ENST00000436994 1285 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 TUBB8P8-201ENST00000458717 1058 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.16■□□□□ 0.66
CCDC27Q2M243 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CCDC27Q2M243 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms