Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
RFX7Q2KHR2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 AC011742.3-201ENST00000439053 820 ntBASIC17.76■□□□□ 0.43
RFX7Q2KHR2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 HLA-J-204ENST00000495278 958 ntBASIC17.76■□□□□ 0.43
RFX7Q2KHR2 AC125604.1-201ENST00000496255 707 ntBASIC17.76■□□□□ 0.43
RFX7Q2KHR2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 AC079328.1-201ENST00000560358 952 ntBASIC17.76■□□□□ 0.43
RFX7Q2KHR2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 AC027601.3-201ENST00000622907 509 ntBASIC17.76■□□□□ 0.43
RFX7Q2KHR2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 AC215219.1-201ENST00000400706 1817 ntBASIC17.76■□□□□ 0.43
RFX7Q2KHR2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX7Q2KHR2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC005089.1-201ENST00000619486 2241 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC097359.2-201ENST00000604992 2389 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC006504.5-208ENST00000588784 2401 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC092506.1-202ENST00000401022 528 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AL008707.1-201ENST00000422498 534 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC104073.2-201ENST00000453737 312 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 RN7SL769P-201ENST00000469386 295 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 RN7SL720P-201ENST00000488178 304 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 NUP210P1-202ENST00000504322 710 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC009779.1-201ENST00000551138 283 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC100827.2-201ENST00000563214 1194 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 FGFR3P5-201ENST00000564496 886 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 AC091544.8-201ENST00000619490 361 ntBASIC17.75■□□□□ 0.43
RFX7Q2KHR2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.75■□□□□ 0.43
RFX7Q2KHR2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 RN7SL832P-201ENST00000607781 1756 ntBASIC17.74■□□□□ 0.43
RFX7Q2KHR2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RFX7Q2KHR2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms