Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 AC092171.3-201ENST00000610122 2651 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 AC022532.1-201ENST00000624563 1728 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 XBP1P1-201ENST00000436573 652 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 AC018638.5-201ENST00000450885 754 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 ANKRD26P1-203ENST00000569528 966 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 MIR4746-201ENST00000579802 71 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 PRR20FP-201ENST00000603320 180 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 AC139713.2-207ENST00000641556 1292 ntBASIC13.53□□□□□ -0.24
CACNA1BQ00975 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CACNA1BQ00975 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CACNA1BQ00975 AC069061.4-201ENST00000581294 1347 ntBASIC13.52□□□□□ -0.24
CACNA1BQ00975 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CACNA1BQ00975 MST1L-201ENST00000442552 2185 ntBASIC13.52□□□□□ -0.24
CACNA1BQ00975 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CACNA1BQ00975 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CACNA1BQ00975 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 AC004923.3-201ENST00000527532 355 ntBASIC13.52□□□□□ -0.24
CACNA1BQ00975 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.52□□□□□ -0.24
CACNA1BQ00975 AL591424.3-201ENST00000614278 872 ntBASIC13.52□□□□□ -0.24
CACNA1BQ00975 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CACNA1BQ00975 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CACNA1BQ00975 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CACNA1BQ00975 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CACNA1BQ00975 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 ASS1P1-201ENST00000402854 1237 ntBASIC13.52□□□□□ -0.25
CACNA1BQ00975 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 AC027601.3-201ENST00000622907 509 ntBASIC13.52□□□□□ -0.25
CACNA1BQ00975 AC009145.4-201ENST00000625119 1294 ntBASIC13.52□□□□□ -0.25
CACNA1BQ00975 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 PCDHA12-202ENST00000613593 2588 ntBASIC13.52□□□□□ -0.25
CACNA1BQ00975 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
CACNA1BQ00975 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 AC006449.5-201ENST00000610658 2098 ntBASIC13.52□□□□□ -0.25
CACNA1BQ00975 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CACNA1BQ00975 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CACNA1BQ00975 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CACNA1BQ00975 AL161772.1-201ENST00000610494 4412 ntBASIC13.51□□□□□ -0.25
CACNA1BQ00975 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CACNA1BQ00975 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CACNA1BQ00975 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CACNA1BQ00975 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CACNA1BQ00975 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CACNA1BQ00975 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms