Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.57■□□□□ 0.08
IRX4P78413 AP001258.2-201ENST00000529891 490 ntBASIC15.57■□□□□ 0.08
IRX4P78413 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 KRT90P-201ENST00000549264 1064 ntBASIC15.57■□□□□ 0.08
IRX4P78413 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.57■□□□□ 0.08
IRX4P78413 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.57■□□□□ 0.08
IRX4P78413 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.57■□□□□ 0.08
IRX4P78413 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.57■□□□□ 0.08
IRX4P78413 AC005252.2-201ENST00000624630 1141 ntBASIC15.57■□□□□ 0.08
IRX4P78413 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.57■□□□□ 0.08
IRX4P78413 LINC01230-201ENST00000625222 3017 ntBASIC15.57■□□□□ 0.08
IRX4P78413 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
IRX4P78413 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
IRX4P78413 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
IRX4P78413 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
IRX4P78413 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IRX4P78413 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
IRX4P78413 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
IRX4P78413 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.56■□□□□ 0.08
IRX4P78413 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.56■□□□□ 0.08
IRX4P78413 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.56■□□□□ 0.08
IRX4P78413 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 RN7SL190P-201ENST00000582519 257 ntBASIC15.56■□□□□ 0.08
IRX4P78413 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.56■□□□□ 0.08
IRX4P78413 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IRX4P78413 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.56■□□□□ 0.08
IRX4P78413 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.56■□□□□ 0.08
IRX4P78413 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
IRX4P78413 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IRX4P78413 PTENP1-202ENST00000532280 3996 ntBASIC15.56■□□□□ 0.08
IRX4P78413 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 CICP14-201ENST00000629111 2732 ntBASIC15.55■□□□□ 0.08
IRX4P78413 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.55■□□□□ 0.08
IRX4P78413 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IRX4P78413 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.55■□□□□ 0.08
IRX4P78413 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
IRX4P78413 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IRX4P78413 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms