Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14□□□□□ -0.17
GABRA4P48169 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 AC006122.1-201ENST00000493323 440 ntBASIC14□□□□□ -0.17
GABRA4P48169 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14□□□□□ -0.17
GABRA4P48169 AC009779.1-201ENST00000551138 283 ntBASIC14□□□□□ -0.17
GABRA4P48169 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14□□□□□ -0.17
GABRA4P48169 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 AL132994.2-201ENST00000603120 687 ntBASIC14□□□□□ -0.17
GABRA4P48169 AC026740.1-201ENST00000607068 791 ntBASIC14□□□□□ -0.17
GABRA4P48169 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14□□□□□ -0.17
GABRA4P48169 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GABRA4P48169 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14□□□□□ -0.17
GABRA4P48169 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 AC144522.1-201ENST00000625111 1658 ntBASIC14□□□□□ -0.17
GABRA4P48169 R3HDM2P2-201ENST00000401880 2116 ntBASIC14□□□□□ -0.17
GABRA4P48169 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14□□□□□ -0.17
GABRA4P48169 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14□□□□□ -0.17
GABRA4P48169 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14□□□□□ -0.17
GABRA4P48169 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
GABRA4P48169 AL354702.1-201ENST00000442006 1960 ntBASIC14□□□□□ -0.17
GABRA4P48169 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GABRA4P48169 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 CICP14-201ENST00000629111 2732 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 AC009093.10-201ENST00000641956 1442 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.99□□□□□ -0.17
GABRA4P48169 DBET-201ENST00000630918 3363 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 CYP46A4P-201ENST00000414953 267 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 AC125604.1-201ENST00000496255 707 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.99□□□□□ -0.17
GABRA4P48169 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.99□□□□□ -0.17
GABRA4P48169 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.99□□□□□ -0.17
GABRA4P48169 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.99□□□□□ -0.17
GABRA4P48169 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.99□□□□□ -0.17
GABRA4P48169 RN7SL774P-201ENST00000577467 290 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.99□□□□□ -0.17
GABRA4P48169 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 AC008805.1-201ENST00000590892 364 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.99□□□□□ -0.17
GABRA4P48169 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GABRA4P48169 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.99□□□□□ -0.17
GABRA4P48169 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GABRA4P48169 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.99□□□□□ -0.17
GABRA4P48169 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.98□□□□□ -0.17
GABRA4P48169 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.98□□□□□ -0.17
GABRA4P48169 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.98□□□□□ -0.17
GABRA4P48169 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GABRA4P48169 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GABRA4P48169 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms