Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SALL4P5-201ENST00000419001 1760 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CEACAM3P40198 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 AL354989.2-201ENST00000435838 1540 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CEACAM3P40198 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
CEACAM3P40198 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 ARSEP1-201ENST00000420443 635 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.18□□□□□ -0.46
CEACAM3P40198 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.18□□□□□ -0.46
CEACAM3P40198 KRT90P-201ENST00000549264 1064 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.18□□□□□ -0.46
CEACAM3P40198 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.18□□□□□ -0.46
CEACAM3P40198 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 AC023090.2-201ENST00000625182 2110 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 RHOXF1P1-202ENST00000635473 501 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 AC126335.2-201ENST00000623362 4637 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 AJ011931.1-201ENST00000618749 2492 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 ST20-AS1-201ENST00000560255 4223 ntBASIC12.18□□□□□ -0.46
CEACAM3P40198 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CEACAM3P40198 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CEACAM3P40198 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.18□□□□□ -0.46
CEACAM3P40198 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CEACAM3P40198 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.17□□□□□ -0.46
CEACAM3P40198 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CEACAM3P40198 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CEACAM3P40198 CNN2P8-201ENST00000421872 913 ntBASIC12.17□□□□□ -0.46
CEACAM3P40198 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.17□□□□□ -0.46
CEACAM3P40198 FAM8A4P-201ENST00000435433 1213 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms