Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.01□□□□□ -0.33
GDNFP39905 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.01□□□□□ -0.33
GDNFP39905 AL033527.5-202ENST00000641632 1098 ntBASIC13.01□□□□□ -0.33
GDNFP39905 AL645728.2-202ENST00000641679 227 ntBASIC13.01□□□□□ -0.33
GDNFP39905 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
GDNFP39905 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 AC073548.1-201ENST00000624088 1882 ntBASIC13.01□□□□□ -0.33
GDNFP39905 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 AGGF1P1-201ENST00000509500 2073 ntBASIC13.01□□□□□ -0.33
GDNFP39905 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GDNFP39905 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.01□□□□□ -0.33
GDNFP39905 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GDNFP39905 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GDNFP39905 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GDNFP39905 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
GDNFP39905 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13□□□□□ -0.33
GDNFP39905 AC023794.5-201ENST00000564380 2157 ntBASIC13□□□□□ -0.33
GDNFP39905 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13□□□□□ -0.33
GDNFP39905 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13□□□□□ -0.33
GDNFP39905 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13□□□□□ -0.33
GDNFP39905 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13□□□□□ -0.33
GDNFP39905 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13□□□□□ -0.33
GDNFP39905 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13□□□□□ -0.33
GDNFP39905 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 MIR943-201ENST00000401286 94 ntBASIC13□□□□□ -0.33
GDNFP39905 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13□□□□□ -0.33
GDNFP39905 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13□□□□□ -0.33
GDNFP39905 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13□□□□□ -0.33
GDNFP39905 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13□□□□□ -0.33
GDNFP39905 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13□□□□□ -0.33
GDNFP39905 AC027369.6-201ENST00000525520 931 ntBASIC13□□□□□ -0.33
GDNFP39905 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13□□□□□ -0.33
GDNFP39905 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
GDNFP39905 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13□□□□□ -0.33
GDNFP39905 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13□□□□□ -0.33
GDNFP39905 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13□□□□□ -0.33
GDNFP39905 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13□□□□□ -0.33
GDNFP39905 AC106028.4-201ENST00000614509 607 ntBASIC13□□□□□ -0.33
GDNFP39905 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 PEG13-201ENST00000631594 5667 ntBASIC13□□□□□ -0.33
GDNFP39905 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 AC019294.4-201ENST00000561777 2905 ntBASIC13□□□□□ -0.33
GDNFP39905 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13□□□□□ -0.33
GDNFP39905 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GDNFP39905 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13□□□□□ -0.33
GDNFP39905 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13□□□□□ -0.33
GDNFP39905 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GDNFP39905 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GDNFP39905 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms