Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VARSP26640 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VARSP26640 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VARSP26640 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VARSP26640 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VARSP26640 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.72□□□□□ -0.05
VARSP26640 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VARSP26640 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
VARSP26640 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VARSP26640 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.71□□□□□ -0.05
VARSP26640 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
VARSP26640 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.71□□□□□ -0.05
VARSP26640 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.71□□□□□ -0.05
VARSP26640 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.71□□□□□ -0.05
VARSP26640 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.71□□□□□ -0.05
VARSP26640 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.71□□□□□ -0.05
VARSP26640 HLA-K-203ENST00000430151 1046 ntBASIC14.71□□□□□ -0.05
VARSP26640 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.71□□□□□ -0.05
VARSP26640 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.71□□□□□ -0.05
VARSP26640 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC14.71□□□□□ -0.05
VARSP26640 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.71□□□□□ -0.05
VARSP26640 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.71□□□□□ -0.05
VARSP26640 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.71□□□□□ -0.05
VARSP26640 AC133539.2-201ENST00000604757 467 ntBASIC14.71□□□□□ -0.05
VARSP26640 WFDC1-204ENST00000613603 549 ntBASIC14.71□□□□□ -0.05
VARSP26640 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VARSP26640 BX539320.1-201ENST00000623759 877 ntBASIC14.71□□□□□ -0.05
VARSP26640 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VARSP26640 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VARSP26640 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
VARSP26640 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
VARSP26640 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VARSP26640 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.71□□□□□ -0.06
VARSP26640 AC018529.2-202ENST00000611482 3087 ntBASIC14.71□□□□□ -0.06
VARSP26640 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VARSP26640 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.71□□□□□ -0.06
VARSP26640 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
VARSP26640 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
VARSP26640 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.71□□□□□ -0.06
VARSP26640 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VARSP26640 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 BEND3P1-201ENST00000421591 1944 ntBASIC14.7□□□□□ -0.06
VARSP26640 BX640514.1-201ENST00000583223 1918 ntBASIC14.7□□□□□ -0.06
VARSP26640 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VARSP26640 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VARSP26640 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.7□□□□□ -0.06
VARSP26640 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 SOCS2P1-201ENST00000417727 557 ntBASIC14.7□□□□□ -0.06
VARSP26640 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.7□□□□□ -0.06
VARSP26640 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VARSP26640 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.7□□□□□ -0.06
VARSP26640 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.7□□□□□ -0.06
VARSP26640 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
VARSP26640 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VARSP26640 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.7□□□□□ -0.06
VARSP26640 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms