Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H1DP16402 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1DP16402 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1DP16402 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H1DP16402 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1DP16402 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1DP16402 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H1DP16402 SALL4P5-201ENST00000419001 1760 ntBASIC12.64□□□□□ -0.39
HIST1H1DP16402 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 KRT18P13-201ENST00000400056 1290 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 AL139094.1-201ENST00000405549 1188 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 UPF3AP3-201ENST00000420996 769 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 TLE1P1-201ENST00000422965 589 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 KLF2P3-201ENST00000451977 1087 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 FAM86LP-201ENST00000478302 853 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC109322.1-201ENST00000524499 1264 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC093813.1-201ENST00000605066 256 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AL136172.1-201ENST00000598590 1394 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 BTBD7P1-201ENST00000447253 1453 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 AL031595.1-201ENST00000623969 4709 ntBASIC12.63□□□□□ -0.39
HIST1H1DP16402 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HIST1H1DP16402 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HIST1H1DP16402 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HIST1H1DP16402 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.62□□□□□ -0.39
HIST1H1DP16402 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms