Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC079316.1-201ENST00000548397 411 ntBASIC15.03■□□□□ -0
HLA-DQB2P05538 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.03■□□□□ -0
HLA-DQB2P05538 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 AL136379.1-201ENST00000623471 2642 ntBASIC15.03■□□□□ -0
HLA-DQB2P05538 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DQB2P05538 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DQB2P05538 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DQB2P05538 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQB2P05538 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQB2P05538 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HLA-DQB2P05538 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DQB2P05538 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HLA-DQB2P05538 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
HLA-DQB2P05538 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HLA-DQB2P05538 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQB2P05538 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQB2P05538 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQB2P05538 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
HLA-DQB2P05538 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HLA-DQB2P05538 HLA-V-201ENST00000429037 534 ntBASIC15.02■□□□□ -0
HLA-DQB2P05538 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQB2P05538 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQB2P05538 HIST2H2BB-201ENST00000449108 381 ntBASIC15.02■□□□□ -0
HLA-DQB2P05538 HOMER2P2-201ENST00000451621 847 ntBASIC15.02■□□□□ -0
HLA-DQB2P05538 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.02■□□□□ -0
HLA-DQB2P05538 IGHV3-71-201ENST00000523324 359 ntBASIC15.02■□□□□ -0
HLA-DQB2P05538 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQB2P05538 AC023310.1-201ENST00000554836 735 ntBASIC15.02■□□□□ -0
HLA-DQB2P05538 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQB2P05538 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.02■□□□□ -0
HLA-DQB2P05538 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DQB2P05538 MIR4259-201ENST00000584466 101 ntBASIC15.02■□□□□ -0
HLA-DQB2P05538 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQB2P05538 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.02■□□□□ -0
HLA-DQB2P05538 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQB2P05538 KHSRPP1-201ENST00000427983 1768 ntBASIC15.02□□□□□ -0.01
HLA-DQB2P05538 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQB2P05538 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.01□□□□□ -0.01
HLA-DQB2P05538 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 AL355994.2-201ENST00000447882 704 ntBASIC15.01□□□□□ -0.01
HLA-DQB2P05538 CSF2RBP1-201ENST00000447905 391 ntBASIC15.01□□□□□ -0.01
HLA-DQB2P05538 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 AC239800.4-201ENST00000603712 296 ntBASIC15.01□□□□□ -0.01
HLA-DQB2P05538 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DQB2P05538 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms