Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.8□□□□□ -0.52
IFNA1P01562 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.8□□□□□ -0.52
IFNA1P01562 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
IFNA1P01562 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.8□□□□□ -0.52
IFNA1P01562 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.8□□□□□ -0.52
IFNA1P01562 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
IFNA1P01562 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 FAM95B1-212ENST00000592873 4692 ntBASIC11.79□□□□□ -0.52
IFNA1P01562 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
IFNA1P01562 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.79□□□□□ -0.52
IFNA1P01562 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.79□□□□□ -0.52
IFNA1P01562 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.79□□□□□ -0.52
IFNA1P01562 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.79□□□□□ -0.52
IFNA1P01562 FOSL1P1-201ENST00000511041 816 ntBASIC11.79□□□□□ -0.52
IFNA1P01562 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.79□□□□□ -0.52
IFNA1P01562 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.79□□□□□ -0.52
IFNA1P01562 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.79□□□□□ -0.52
IFNA1P01562 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.79□□□□□ -0.52
IFNA1P01562 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.79□□□□□ -0.52
IFNA1P01562 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.79□□□□□ -0.52
IFNA1P01562 AC008735.5-201ENST00000623544 497 ntBASIC11.79□□□□□ -0.52
IFNA1P01562 AC007064.4-201ENST00000637740 555 ntBASIC11.79□□□□□ -0.52
IFNA1P01562 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.79□□□□□ -0.52
IFNA1P01562 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.79□□□□□ -0.52
IFNA1P01562 PCDHB18P-202ENST00000526308 3197 ntBASIC11.79□□□□□ -0.52
IFNA1P01562 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC11.79□□□□□ -0.52
IFNA1P01562 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
IFNA1P01562 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
IFNA1P01562 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
IFNA1P01562 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.78□□□□□ -0.52
IFNA1P01562 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
IFNA1P01562 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.78□□□□□ -0.52
IFNA1P01562 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms