Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.99□□□□□ -0.01
KDELR3O43731 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.99□□□□□ -0.01
KDELR3O43731 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.99□□□□□ -0.01
KDELR3O43731 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
KDELR3O43731 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
KDELR3O43731 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.99□□□□□ -0.01
KDELR3O43731 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.99□□□□□ -0.01
KDELR3O43731 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
KDELR3O43731 AL118558.3-201ENST00000607414 1079 ntBASIC14.99□□□□□ -0.01
KDELR3O43731 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.99□□□□□ -0.01
KDELR3O43731 AC007663.3-201ENST00000609632 465 ntBASIC14.99□□□□□ -0.01
KDELR3O43731 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
KDELR3O43731 AL008638.5-201ENST00000623814 1298 ntBASIC14.99□□□□□ -0.01
KDELR3O43731 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.99□□□□□ -0.01
KDELR3O43731 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.99□□□□□ -0.01
KDELR3O43731 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KDELR3O43731 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.99□□□□□ -0.01
KDELR3O43731 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.99□□□□□ -0.01
KDELR3O43731 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.99□□□□□ -0.01
KDELR3O43731 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 AC018735.1-201ENST00000437208 1502 ntBASIC14.98□□□□□ -0.01
KDELR3O43731 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.98□□□□□ -0.01
KDELR3O43731 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.98□□□□□ -0.01
KDELR3O43731 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.98□□□□□ -0.01
KDELR3O43731 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 AC005324.6-201ENST00000587972 613 ntBASIC14.98□□□□□ -0.01
KDELR3O43731 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 AC009884.2-201ENST00000603110 324 ntBASIC14.98□□□□□ -0.01
KDELR3O43731 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.98□□□□□ -0.01
KDELR3O43731 Z98259.2-201ENST00000641583 609 ntBASIC14.98□□□□□ -0.01
KDELR3O43731 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.98□□□□□ -0.01
KDELR3O43731 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KDELR3O43731 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
KDELR3O43731 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.98□□□□□ -0.01
KDELR3O43731 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 AL008718.2-201ENST00000609206 1313 ntBASIC14.97□□□□□ -0.01
KDELR3O43731 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KDELR3O43731 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.97□□□□□ -0.01
KDELR3O43731 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms