Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD2O14647 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD2O14647 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 PRAL-201ENST00000624952 3286 ntBASIC19.87■□□□□ 0.77
CHD2O14647 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD2O14647 LINC00115-201ENST00000473798 1317 ntBASIC19.87■□□□□ 0.77
CHD2O14647 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD2O14647 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD2O14647 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHD2O14647 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 SIRPB3P-201ENST00000340424 1216 ntBASIC19.87■□□□□ 0.77
CHD2O14647 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHD2O14647 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC19.87■□□□□ 0.77
CHD2O14647 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHD2O14647 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC19.87■□□□□ 0.77
CHD2O14647 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 AC104506.1-201ENST00000609247 429 ntBASIC19.87■□□□□ 0.77
CHD2O14647 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC19.87■□□□□ 0.77
CHD2O14647 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHD2O14647 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.87■□□□□ 0.77
CHD2O14647 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD2O14647 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD2O14647 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD2O14647 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD2O14647 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD2O14647 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHD2O14647 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC19.86■□□□□ 0.77
CHD2O14647 VENTXP4-201ENST00000449029 958 ntBASIC19.86■□□□□ 0.77
CHD2O14647 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD2O14647 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD2O14647 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD2O14647 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 AL359219.1-201ENST00000556311 934 ntBASIC19.86■□□□□ 0.77
CHD2O14647 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD2O14647 AC079414.2-201ENST00000567157 1104 ntBASIC19.86■□□□□ 0.77
CHD2O14647 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD2O14647 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHD2O14647 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD2O14647 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHD2O14647 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHD2O14647 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 GPX3-202ENST00000517973 612 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD2O14647 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD2O14647 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHD2O14647 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD2O14647 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHD2O14647 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD2O14647 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CHD2O14647 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD2O14647 RN7SL351P-201ENST00000469306 248 ntBASIC19.85■□□□□ 0.77
CHD2O14647 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD2O14647 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD2O14647 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD2O14647 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.85■□□□□ 0.77
CHD2O14647 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
CHD2O14647 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CHD2O14647 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD2O14647 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHD2O14647 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.84■□□□□ 0.77
CHD2O14647 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHD2O14647 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHD2O14647 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms