Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.85■□□□□ 0.61
CHL1O00533 RN7SL574P-201ENST00000581512 297 ntBASIC18.85■□□□□ 0.61
CHL1O00533 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CHL1O00533 AL021578.1-201ENST00000613646 709 ntBASIC18.85■□□□□ 0.61
CHL1O00533 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.85■□□□□ 0.61
CHL1O00533 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHL1O00533 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHL1O00533 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHL1O00533 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHL1O00533 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHL1O00533 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC18.85■□□□□ 0.61
CHL1O00533 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHL1O00533 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHL1O00533 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHL1O00533 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.85■□□□□ 0.61
CHL1O00533 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.85■□□□□ 0.61
CHL1O00533 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHL1O00533 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.85■□□□□ 0.61
CHL1O00533 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.85■□□□□ 0.61
CHL1O00533 LINC00552-201ENST00000625151 2579 ntBASIC18.85■□□□□ 0.61
CHL1O00533 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.84■□□□□ 0.61
CHL1O00533 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CHL1O00533 AC015802.1-201ENST00000588104 1449 ntBASIC18.84■□□□□ 0.61
CHL1O00533 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.84■□□□□ 0.61
CHL1O00533 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CHL1O00533 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.84■□□□□ 0.61
CHL1O00533 ISCA2P1-201ENST00000425548 448 ntBASIC18.84■□□□□ 0.61
CHL1O00533 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.84■□□□□ 0.61
CHL1O00533 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHL1O00533 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.84■□□□□ 0.61
CHL1O00533 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.84■□□□□ 0.61
CHL1O00533 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.84■□□□□ 0.61
CHL1O00533 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHL1O00533 AC104506.1-201ENST00000609247 429 ntBASIC18.84■□□□□ 0.61
CHL1O00533 AC091544.8-201ENST00000619490 361 ntBASIC18.84■□□□□ 0.61
CHL1O00533 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHL1O00533 AC097359.2-201ENST00000604992 2389 ntBASIC18.84■□□□□ 0.61
CHL1O00533 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHL1O00533 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.84■□□□□ 0.61
CHL1O00533 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
CHL1O00533 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHL1O00533 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHL1O00533 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHL1O00533 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHL1O00533 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CHL1O00533 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CHL1O00533 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.83■□□□□ 0.61
CHL1O00533 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHL1O00533 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.83■□□□□ 0.61
CHL1O00533 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHL1O00533 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CHL1O00533 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 SLC25A24P2-201ENST00000415059 510 ntBASIC18.83■□□□□ 0.6
CHL1O00533 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.83■□□□□ 0.6
CHL1O00533 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.83■□□□□ 0.6
CHL1O00533 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.83■□□□□ 0.6
CHL1O00533 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.83■□□□□ 0.6
CHL1O00533 AC005586.2-201ENST00000563946 837 ntBASIC18.83■□□□□ 0.6
CHL1O00533 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.83■□□□□ 0.6
CHL1O00533 AC097724.1-201ENST00000609581 426 ntBASIC18.83■□□□□ 0.6
CHL1O00533 MEG3_2.1-201ENST00000611456 105 ntBASIC18.83■□□□□ 0.6
CHL1O00533 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.83■□□□□ 0.6
CHL1O00533 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.83■□□□□ 0.6
CHL1O00533 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.83■□□□□ 0.6
CHL1O00533 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHL1O00533 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHL1O00533 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHL1O00533 AC090505.1-201ENST00000430515 1834 ntBASIC18.82■□□□□ 0.6
CHL1O00533 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 AC232323.1-201ENST00000540724 2099 ntBASIC18.82■□□□□ 0.6
CHL1O00533 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.82■□□□□ 0.6
CHL1O00533 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHL1O00533 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.82■□□□□ 0.6
CHL1O00533 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms