Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A1O00337 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SLC28A1O00337 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC28A1O00337 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SLC28A1O00337 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.33□□□□□ -0.11
SLC28A1O00337 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SLC28A1O00337 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SLC28A1O00337 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.33□□□□□ -0.11
SLC28A1O00337 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SLC28A1O00337 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SLC28A1O00337 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC007541.1-201ENST00000570282 1469 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC016397.2-201ENST00000624848 1985 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC28A1O00337 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A1O00337 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SLC28A1O00337 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC098850.1-201ENST00000419919 790 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A1O00337 MYCLP2-201ENST00000449268 967 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 FO681548.1-201ENST00000455617 1132 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A1O00337 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC138761.1-201ENST00000584393 385 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SLC28A1O00337 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A1O00337 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.33□□□□□ -0.12
SLC28A1O00337 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A1O00337 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SLC28A1O00337 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.33□□□□□ -0.12
SLC28A1O00337 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 KRT8P35-201ENST00000483942 1338 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A1O00337 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLC28A1O00337 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 AC005840.4-201ENST00000541242 2494 ntBASIC14.33□□□□□ -0.12
SLC28A1O00337 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.33□□□□□ -0.12
SLC28A1O00337 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLC28A1O00337 MST1P2-201ENST00000457982 2291 ntBASIC14.32□□□□□ -0.12
SLC28A1O00337 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.32□□□□□ -0.12
SLC28A1O00337 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SLC28A1O00337 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLC28A1O00337 AC104581.4-201ENST00000623126 3052 ntBASIC14.32□□□□□ -0.12
SLC28A1O00337 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SLC28A1O00337 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC28A1O00337 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.32□□□□□ -0.12
SLC28A1O00337 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
SLC28A1O00337 AL132655.2-201ENST00000596276 594 ntBASIC14.32□□□□□ -0.12
SLC28A1O00337 AC004233.3-201ENST00000607794 1269 ntBASIC14.32□□□□□ -0.12
SLC28A1O00337 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A1O00337 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A1O00337 AC015688.4-201ENST00000580780 1647 ntBASIC14.32□□□□□ -0.12
SLC28A1O00337 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms