Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TMEM88BA6NKF7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
TMEM88BA6NKF7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 PPP1R2P4-201ENST00000424051 595 ntBASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 AC140658.4-201ENST00000561990 352 ntBASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 AL365181.1-201ENST00000564032 1828 ntBASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 EEF1DP7-201ENST00000580496 513 ntBASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 AL021707.6-201ENST00000609212 491 ntBASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 URAHP-205ENST00000610227 398 ntBASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TMEM88BA6NKF7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 AL773545.2-201ENST00000442149 472 ntBASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 STK24P1-201ENST00000455035 1291 ntBASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 ALG1L15P-201ENST00000482834 794 ntBASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 AC147876.1-201ENST00000504408 322 ntBASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 EEF1GP8-201ENST00000506566 1154 ntBASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 MYL6-215ENST00000549566 685 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 AC006986.1-201ENST00000612764 241 ntBASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM88BA6NKF7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 FAM21EP-201ENST00000417804 985 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 RN7SL173P-201ENST00000461853 292 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 AC025594.1-201ENST00000469533 543 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 RN7SKP155-201ENST00000516031 288 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 AC079414.2-201ENST00000567157 1104 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ANKRD26P1-203ENST00000569528 966 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 RN7SL524P-201ENST00000581152 300 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 AL009176.1-201ENST00000607876 650 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms