Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 AC099521.3-201ENST00000624251 2938 ntBASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
KCNIP3Q9Y2W7 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 CES1P1-201ENST00000421606 1704 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 TIMM8BP1-201ENST00000452384 211 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AC004066.1-201ENST00000502488 802 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 KRT8P48-201ENST00000515599 1220 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 RNA5SP419-201ENST00000515908 135 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AC092902.6-201ENST00000641783 218 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AL360270.3-201ENST00000609118 1348 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AL035456.1-201ENST00000456064 1369 ntBASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.52□□□□□ -0.41
KCNIP3Q9Y2W7 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 AC015922.1-201ENST00000421102 1152 ntBASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 ACTG1P14-201ENST00000446382 1122 ntBASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 AC104692.2-201ENST00000603054 253 ntBASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 RN7SL828P-201ENST00000607615 303 ntBASIC12.51□□□□□ -0.41
KCNIP3Q9Y2W7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 640.6 ms