Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 LINC02228-204ENST00000642115 2962 ntBASIC19.64■□□□□ 0.74
NPC1L1Q9UHC9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPC1L1Q9UHC9 AC023908.3-201ENST00000564211 3047 ntBASIC19.64■□□□□ 0.74
NPC1L1Q9UHC9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 AC012617.1-204ENST00000586340 2305 ntBASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 TCAM1P-207ENST00000485295 1537 ntBASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 LINC01165-201ENST00000445190 1623 ntBASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
NPC1L1Q9UHC9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 TSPY25P-201ENST00000429463 745 ntBASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 AC103810.3-201ENST00000583567 96 ntBASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 HSPA8P5-201ENST00000456928 2069 ntBASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPC1L1Q9UHC9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 GOLGA8DP-202ENST00000341390 2184 ntBASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 SHMT1P1-201ENST00000419974 1312 ntBASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 228.5 ms