Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 WASH7P-201ENST00000488147 1351 ntBASIC13.56□□□□□ -0.24
DKK4Q9UBT3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DKK4Q9UBT3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 DOC2GP-204ENST00000639052 2548 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC090616.6-203ENST00000579186 1945 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC092850.2-201ENST00000623821 2697 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 PPP1R2P4-201ENST00000424051 595 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC092580.1-201ENST00000433998 658 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 IGHV1-12-201ENST00000518307 205 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AL590235.1-201ENST00000564650 861 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 TRMT112P3-201ENST00000580149 358 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AL591471.1-201ENST00000621855 229 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 NFIC-211ENST00000641145 8399 ntBASIC13.55□□□□□ -0.24
DKK4Q9UBT3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
DKK4Q9UBT3 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AP002353.1-201ENST00000528257 1599 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AC023090.2-201ENST00000625182 2110 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AP000354.1-201ENST00000396982 456 ntBASIC13.54□□□□□ -0.24
DKK4Q9UBT3 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.54□□□□□ -0.24
DKK4Q9UBT3 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms