Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
POLR2J2Q9GZM3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 AL512638.1-201ENST00000457493 794 ntBASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 AC104794.3-201ENST00000566840 1248 ntBASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 AL390955.2-201ENST00000603032 514 ntBASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 KRT18P28-201ENST00000453838 1332 ntBASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 INTS4P2-202ENST00000614726 2019 ntBASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
POLR2J2Q9GZM3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 CICP17-201ENST00000418553 2377 ntBASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 AC011474.4-201ENST00000623523 2076 ntBASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 AC131212.3-201ENST00000624087 4219 ntBASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
POLR2J2Q9GZM3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms