Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL391069.4-201ENST00000609583 481 ntBASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 AC008761.3-201ENST00000624803 892 ntBASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 CICP16-201ENST00000502609 2813 ntBASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 KRT8P22-201ENST00000562317 1415 ntBASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
AMBRA1Q9C0C7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 AL353779.1-201ENST00000434793 351 ntBASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 MEIS3P1-201ENST00000495167 958 ntBASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 AL008721.1-201ENST00000609964 604 ntBASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
AMBRA1Q9C0C7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 DRD5P1-201ENST00000456605 1438 ntBASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.96□□□□□ -0.18
AMBRA1Q9C0C7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 AC236430.1-201ENST00000402231 743 ntBASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 SPTLC1P1-201ENST00000447199 261 ntBASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 SERBP1P5-201ENST00000510079 1181 ntBASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 AC135586.1-201ENST00000539323 574 ntBASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 LINC02560-201ENST00000596379 459 ntBASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AMBRA1Q9C0C7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms