Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AC022447.6-201ENST00000515522 438 ntBASIC13.74□□□□□ -0.21
TRIM2Q9C040 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AC005252.2-201ENST00000624630 1141 ntBASIC13.74□□□□□ -0.21
TRIM2Q9C040 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 SNX18-202ENST00000343017 3140 ntBASIC13.74□□□□□ -0.21
TRIM2Q9C040 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.74□□□□□ -0.21
TRIM2Q9C040 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRIM2Q9C040 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 ACTBP8-201ENST00000403258 1108 ntBASIC13.73□□□□□ -0.21
TRIM2Q9C040 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 AC007969.1-201ENST00000433675 447 ntBASIC13.73□□□□□ -0.21
TRIM2Q9C040 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 AP001267.2-201ENST00000532619 2086 ntBASIC13.73□□□□□ -0.21
TRIM2Q9C040 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 AL122018.1-201ENST00000446607 2310 ntBASIC13.73□□□□□ -0.21
TRIM2Q9C040 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRIM2Q9C040 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRIM2Q9C040 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRIM2Q9C040 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM2Q9C040 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms