Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 STRCP1-201ENST00000509801 5328 ntBASIC12.12□□□□□ -0.47
RAB40CQ96S21 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AC027612.1-201ENST00000445234 2395 ntBASIC12.12□□□□□ -0.47
RAB40CQ96S21 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB40CQ96S21 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB40CQ96S21 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC011840.2-201ENST00000563063 1520 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC023794.5-201ENST00000564380 2157 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AL137783.1-201ENST00000623494 1896 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 RN7SL832P-201ENST00000607781 1756 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC005237.2-201ENST00000434368 219 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC000095.1-201ENST00000603208 874 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 MIR6074-201ENST00000612054 107 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AL033527.5-202ENST00000641632 1098 ntBASIC12.11□□□□□ -0.47
RAB40CQ96S21 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RAB40CQ96S21 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB40CQ96S21 AC099521.3-201ENST00000624251 2938 ntBASIC12.1□□□□□ -0.47
RAB40CQ96S21 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB40CQ96S21 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
RAB40CQ96S21 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms