Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM43Q96BQ3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM43Q96BQ3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM43Q96BQ3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM43Q96BQ3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM43Q96BQ3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM43Q96BQ3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM43Q96BQ3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM43Q96BQ3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 BRD7P5-201ENST00000299197 1822 ntBASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AC092580.1-201ENST00000433998 658 ntBASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AC095040.1-201ENST00000513286 675 ntBASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 CYP4F36P-201ENST00000589193 186 ntBASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AL136172.1-201ENST00000598590 1394 ntBASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM43Q96BQ3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 AP005117.1-202ENST00000581724 1908 ntBASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 CYP2T1P-202ENST00000641596 2535 ntBASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 OR51A9P-201ENST00000422578 911 ntBASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 AC083801.1-201ENST00000491689 358 ntBASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM43Q96BQ3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM43Q96BQ3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms