Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC107918.4-201ENST00000641966 3141 ntBASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AL589987.1-201ENST00000453380 819 ntBASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC022447.6-201ENST00000515522 438 ntBASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC089987.1-201ENST00000551654 2209 ntBASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RTN4IP1Q8WWV3 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.58□□□□□ -0.39
RTN4IP1Q8WWV3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RTN4IP1Q8WWV3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RTN4IP1Q8WWV3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RTN4IP1Q8WWV3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AC018665.1-201ENST00000622927 1362 ntBASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 DOC2GP-202ENST00000514950 1163 ntBASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 TPRX2P-201ENST00000535362 881 ntBASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.58□□□□□ -0.4
RTN4IP1Q8WWV3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms