Protein–RNA interactions for Protein: Q8NBK3

SUMF1, Sulfatase-modifying factor 1, humanhuman

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1Q8NBK3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 OR2R1P-201ENST00000441404 914 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 GNG10P1-201ENST00000452289 199 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 RPL18AP8-201ENST00000486071 528 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AC023906.1-201ENST00000486386 453 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 TREHP1-201ENST00000531328 465 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AC003686.1-201ENST00000550956 1034 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 HYMAI-201ENST00000635591 3347 ntBASIC14.43□□□□□ -0.1
SUMF1Q8NBK3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 AL596087.1-201ENST00000400979 1969 ntBASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 AC018638.5-201ENST00000450885 754 ntBASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 OR5BD1P-201ENST00000532527 817 ntBASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SUMF1Q8NBK3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms