Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 AC245100.3-201ENST00000441281 285 ntBASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 AC007389.4-201ENST00000454674 793 ntBASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TPT1P11-201ENST00000458482 498 ntBASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 RN7SL48P-201ENST00000579283 293 ntBASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 AC003102.2-201ENST00000589195 1469 ntBASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TTC9CQ8N5M4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC005089.1-201ENST00000619486 2241 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AL355864.2-201ENST00000447420 863 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC015936.2-201ENST00000593177 259 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ENPP7P14-201ENST00000621765 1040 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 RPSAP52-203ENST00000622976 1023 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC132938.4-201ENST00000623835 848 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 MSTO2P-201ENST00000314835 1709 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 AC005912.2-201ENST00000619492 2400 ntBASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TTC9CQ8N5M4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms