Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TSR1Q2NL82 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TSR1Q2NL82 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 RFPL4AP1-201ENST00000530883 850 ntBASIC16.43■□□□□ 0.22
TSR1Q2NL82 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 AL391001.1-201ENST00000602747 715 ntBASIC16.43■□□□□ 0.22
TSR1Q2NL82 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 TEX28P1-201ENST00000613479 1221 ntBASIC16.43■□□□□ 0.22
TSR1Q2NL82 TEX28P2-201ENST00000617764 1221 ntBASIC16.43■□□□□ 0.22
TSR1Q2NL82 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 AL157414.3-201ENST00000624276 1954 ntBASIC16.43■□□□□ 0.22
TSR1Q2NL82 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.43■□□□□ 0.22
TSR1Q2NL82 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TSR1Q2NL82 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.43■□□□□ 0.22
TSR1Q2NL82 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 AC010336.2-201ENST00000564226 506 ntBASIC16.42■□□□□ 0.22
TSR1Q2NL82 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TSR1Q2NL82 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TSR1Q2NL82 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TSR1Q2NL82 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms