Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CLK3P2-201ENST00000427566 1453 ntBASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AL133267.1-201ENST00000398220 340 ntBASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AC009078.2-202ENST00000463353 338 ntBASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 RARRES2P8-201ENST00000566335 367 ntBASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 SLC25A6P4-201ENST00000586535 553 ntBASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AC099522.2-201ENST00000607001 744 ntBASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AC074044.1-201ENST00000609673 707 ntBASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.8■□□□□ 0.12
ERCC6LQ2NKX8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 AP000437.1-201ENST00000624057 2085 ntBASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 BCAR1-209ENST00000546196 1340 ntBASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 AC074338.1-201ENST00000416825 156 ntBASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 AC098831.1-202ENST00000438821 336 ntBASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 AL049840.3-201ENST00000602669 611 ntBASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 AC004877.2-201ENST00000623941 599 ntBASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ERCC6LQ2NKX8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC011498.7-201ENST00000624986 2027 ntBASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ERCC6LQ2NKX8 AC125807.2-201ENST00000513358 3514 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms