Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDR1Q08345 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDR1Q08345 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDR1Q08345 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.11■□□□□ 0.49
DDR1Q08345 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
DDR1Q08345 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
DDR1Q08345 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDR1Q08345 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
DDR1Q08345 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDR1Q08345 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDR1Q08345 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDR1Q08345 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.1■□□□□ 0.49
DDR1Q08345 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.1■□□□□ 0.49
DDR1Q08345 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 WASH3P-207ENST00000560956 1394 ntBASIC18.1■□□□□ 0.49
DDR1Q08345 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
DDR1Q08345 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.1■□□□□ 0.49
DDR1Q08345 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.1■□□□□ 0.49
DDR1Q08345 RNA5SP406-201ENST00000516106 112 ntBASIC18.1■□□□□ 0.49
DDR1Q08345 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.1■□□□□ 0.49
DDR1Q08345 PEBP1P2-201ENST00000603980 558 ntBASIC18.1■□□□□ 0.49
DDR1Q08345 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.1■□□□□ 0.49
DDR1Q08345 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.1■□□□□ 0.49
DDR1Q08345 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
DDR1Q08345 AC068418.2-201ENST00000577309 3703 ntBASIC18.1■□□□□ 0.49
DDR1Q08345 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDR1Q08345 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 CTBP2P8-201ENST00000422584 1330 ntBASIC18.09■□□□□ 0.49
DDR1Q08345 TEKT4P2-202ENST00000559466 1312 ntBASIC18.09■□□□□ 0.49
DDR1Q08345 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DDR1Q08345 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.09■□□□□ 0.49
DDR1Q08345 AC244197.1-201ENST00000456494 951 ntBASIC18.09■□□□□ 0.49
DDR1Q08345 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 TREHP1-201ENST00000531328 465 ntBASIC18.09■□□□□ 0.49
DDR1Q08345 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.09■□□□□ 0.49
DDR1Q08345 AC027139.1-201ENST00000565286 951 ntBASIC18.09■□□□□ 0.49
DDR1Q08345 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.09■□□□□ 0.49
DDR1Q08345 AL365203.3-201ENST00000609742 2057 ntBASIC18.09■□□□□ 0.49
DDR1Q08345 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.09■□□□□ 0.49
DDR1Q08345 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DDR1Q08345 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDR1Q08345 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.09■□□□□ 0.49
DDR1Q08345 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms