Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 AC003102.2-201ENST00000589195 1469 ntBASIC14.38□□□□□ -0.11
HMGCS1Q01581 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 WASH4P-201ENST00000564273 1246 ntBASIC14.37□□□□□ -0.11
HMGCS1Q01581 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMGCS1Q01581 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.37□□□□□ -0.11
HMGCS1Q01581 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ACTBP8-201ENST00000403258 1108 ntBASIC14.36□□□□□ -0.11
HMGCS1Q01581 AC007969.1-201ENST00000433675 447 ntBASIC14.36□□□□□ -0.11
HMGCS1Q01581 FO681548.1-201ENST00000455617 1132 ntBASIC14.36□□□□□ -0.11
HMGCS1Q01581 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 WFDC1-204ENST00000613603 549 ntBASIC14.36□□□□□ -0.11
HMGCS1Q01581 CU634019.7-201ENST00000624153 1185 ntBASIC14.36□□□□□ -0.11
HMGCS1Q01581 FP236241.2-201ENST00000624906 1185 ntBASIC14.36□□□□□ -0.11
HMGCS1Q01581 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.36□□□□□ -0.11
HMGCS1Q01581 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms