Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MTHFRP42898 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 FRMPD2B-201ENST00000431305 1347 ntBASIC15.52■□□□□ 0.08
MTHFRP42898 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.52■□□□□ 0.08
MTHFRP42898 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 OR2K2-202ENST00000374428 1038 ntBASIC15.52■□□□□ 0.08
MTHFRP42898 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.52■□□□□ 0.08
MTHFRP42898 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.52■□□□□ 0.08
MTHFRP42898 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 RPL8P2-201ENST00000430538 502 ntBASIC15.52■□□□□ 0.08
MTHFRP42898 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.52■□□□□ 0.08
MTHFRP42898 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.52■□□□□ 0.08
MTHFRP42898 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.52■□□□□ 0.08
MTHFRP42898 AC130709.1-201ENST00000484779 1212 ntBASIC15.52■□□□□ 0.08
MTHFRP42898 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MTHFRP42898 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.52■□□□□ 0.08
MTHFRP42898 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.52■□□□□ 0.08
MTHFRP42898 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
MTHFRP42898 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.52■□□□□ 0.08
MTHFRP42898 MIR6769A-201ENST00000617340 73 ntBASIC15.52■□□□□ 0.08
MTHFRP42898 AC009084.3-201ENST00000623356 437 ntBASIC15.52■□□□□ 0.08
MTHFRP42898 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
MTHFRP42898 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
MTHFRP42898 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
MTHFRP42898 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
MTHFRP42898 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
MTHFRP42898 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
MTHFRP42898 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MTHFRP42898 AC067930.6-201ENST00000623257 4947 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 CAP2P1-201ENST00000557743 1390 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 AC099063.4-201ENST00000641099 1602 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
MTHFRP42898 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.51■□□□□ 0.07
MTHFRP42898 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
MTHFRP42898 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.51■□□□□ 0.07
MTHFRP42898 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.51■□□□□ 0.07
MTHFRP42898 AL109837.1-201ENST00000603272 613 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 LINC01783-202ENST00000614408 828 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.51■□□□□ 0.07
MTHFRP42898 BX284668.2-205ENST00000619677 828 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 AC007718.1-201ENST00000621078 280 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 AC025271.4-201ENST00000621477 1726 ntBASIC15.51■□□□□ 0.07
MTHFRP42898 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.51■□□□□ 0.07
MTHFRP42898 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MTHFRP42898 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MTHFRP42898 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.5■□□□□ 0.07
MTHFRP42898 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MTHFRP42898 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MTHFRP42898 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MTHFRP42898 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MTHFRP42898 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MTHFRP42898 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms