Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CDKN2BP42772 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.33■□□□□ 0.04
CDKN2BP42772 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.33■□□□□ 0.04
CDKN2BP42772 RN7SL837P-201ENST00000463010 287 ntBASIC15.33■□□□□ 0.04
CDKN2BP42772 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 AC106820.3-201ENST00000561653 397 ntBASIC15.33■□□□□ 0.04
CDKN2BP42772 AC025279.2-201ENST00000569730 653 ntBASIC15.33■□□□□ 0.04
CDKN2BP42772 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.33■□□□□ 0.04
CDKN2BP42772 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDKN2BP42772 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.33■□□□□ 0.04
CDKN2BP42772 AC132938.4-201ENST00000623835 848 ntBASIC15.33■□□□□ 0.04
CDKN2BP42772 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.33■□□□□ 0.04
CDKN2BP42772 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.33■□□□□ 0.04
CDKN2BP42772 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CDKN2BP42772 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.33■□□□□ 0.04
CDKN2BP42772 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.33■□□□□ 0.04
CDKN2BP42772 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKN2BP42772 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.32■□□□□ 0.04
CDKN2BP42772 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 CICP4-201ENST00000447359 2812 ntBASIC15.32■□□□□ 0.04
CDKN2BP42772 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CDKN2BP42772 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN2BP42772 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN2BP42772 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN2BP42772 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN2BP42772 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN2BP42772 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKN2BP42772 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN2BP42772 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN2BP42772 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2BP42772 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2BP42772 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2BP42772 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2BP42772 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2BP42772 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2BP42772 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2BP42772 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2BP42772 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2BP42772 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2BP42772 TPM3P8-201ENST00000330554 643 ntBASIC15.31■□□□□ 0.04
CDKN2BP42772 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms