Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PTPN6P29350 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTPN6P29350 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTPN6P29350 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 RNU1-114P-201ENST00000365297 166 ntBASIC14.13□□□□□ -0.15
PTPN6P29350 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.13□□□□□ -0.15
PTPN6P29350 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 EIF3FP3-201ENST00000434851 1086 ntBASIC14.13□□□□□ -0.15
PTPN6P29350 AL162726.2-201ENST00000438986 1017 ntBASIC14.13□□□□□ -0.15
PTPN6P29350 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.13□□□□□ -0.15
PTPN6P29350 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.13□□□□□ -0.15
PTPN6P29350 AC132938.2-201ENST00000579188 680 ntBASIC14.13□□□□□ -0.15
PTPN6P29350 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.13□□□□□ -0.15
PTPN6P29350 AL591163.1-201ENST00000641757 987 ntBASIC14.13□□□□□ -0.15
PTPN6P29350 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 KRT8P22-201ENST00000562317 1415 ntBASIC14.13□□□□□ -0.15
PTPN6P29350 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PTPN6P29350 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTPN6P29350 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
PTPN6P29350 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 CICP16-201ENST00000502609 2813 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 C1QBPP1-201ENST00000400117 770 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 SOCS2P1-201ENST00000417727 557 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 GIMAP3P-201ENST00000495150 836 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 CU634019.7-201ENST00000624153 1185 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 FP236241.2-201ENST00000624906 1185 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.12□□□□□ -0.15
PTPN6P29350 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.12□□□□□ -0.15
PTPN6P29350 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms