Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
GDF1P27539 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 GPAA1P2-201ENST00000417923 928 ntBASIC13.48□□□□□ -0.25
GDF1P27539 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.48□□□□□ -0.25
GDF1P27539 AC004898.1-201ENST00000451057 766 ntBASIC13.48□□□□□ -0.25
GDF1P27539 KRT8P13-201ENST00000463294 1010 ntBASIC13.48□□□□□ -0.25
GDF1P27539 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 AC005730.2-201ENST00000564549 1184 ntBASIC13.48□□□□□ -0.25
GDF1P27539 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 AC006058.4-201ENST00000624016 1670 ntBASIC13.47□□□□□ -0.25
GDF1P27539 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 LINC00528-201ENST00000600723 2160 ntBASIC13.47□□□□□ -0.25
GDF1P27539 LINC01101-201ENST00000622953 1884 ntBASIC13.47□□□□□ -0.25
GDF1P27539 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 CICP23-201ENST00000605013 2741 ntBASIC13.47□□□□□ -0.25
GDF1P27539 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.47□□□□□ -0.25
GDF1P27539 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 AC126915.1-201ENST00000522847 1038 ntBASIC13.47□□□□□ -0.25
GDF1P27539 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.47□□□□□ -0.25
GDF1P27539 MIR3615-201ENST00000581999 87 ntBASIC13.47□□□□□ -0.25
GDF1P27539 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
GDF1P27539 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GDF1P27539 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms