Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
SMIM17P0DL12 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.18□□□□□ -0.62
SMIM17P0DL12 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
SMIM17P0DL12 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 AP001972.5-201ENST00000624624 2338 ntBASIC11.18□□□□□ -0.62
SMIM17P0DL12 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.18□□□□□ -0.62
SMIM17P0DL12 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SMIM17P0DL12 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SMIM17P0DL12 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.18□□□□□ -0.62
SMIM17P0DL12 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 CICP16-201ENST00000502609 2813 ntBASIC11.17□□□□□ -0.62
SMIM17P0DL12 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 KRT18P3-201ENST00000451602 1288 ntBASIC11.17□□□□□ -0.62
SMIM17P0DL12 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 RNA5SP419-201ENST00000515908 135 ntBASIC11.17□□□□□ -0.62
SMIM17P0DL12 AC243562.1-201ENST00000560672 389 ntBASIC11.17□□□□□ -0.62
SMIM17P0DL12 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SMIM17P0DL12 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.17□□□□□ -0.62
SMIM17P0DL12 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms