Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.9■□□□□ 0.46
APPP05067 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.9■□□□□ 0.46
APPP05067 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
APPP05067 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APPP05067 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
APPP05067 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APPP05067 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
APPP05067 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APPP05067 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.89■□□□□ 0.46
APPP05067 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
APPP05067 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
APPP05067 AC003102.2-201ENST00000589195 1469 ntBASIC17.89■□□□□ 0.45
APPP05067 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
APPP05067 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
APPP05067 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
APPP05067 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
APPP05067 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.89■□□□□ 0.45
APPP05067 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.89■□□□□ 0.45
APPP05067 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
APPP05067 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
APPP05067 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.89■□□□□ 0.45
APPP05067 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
APPP05067 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.89■□□□□ 0.45
APPP05067 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
APPP05067 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.89■□□□□ 0.45
APPP05067 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APPP05067 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.88■□□□□ 0.45
APPP05067 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.88■□□□□ 0.45
APPP05067 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.88■□□□□ 0.45
APPP05067 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.88■□□□□ 0.45
APPP05067 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
APPP05067 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.88■□□□□ 0.45
APPP05067 C2orf69P2-201ENST00000562032 1123 ntBASIC17.88■□□□□ 0.45
APPP05067 DUX4L45-201ENST00000566406 1057 ntBASIC17.88■□□□□ 0.45
APPP05067 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
APPP05067 MIR4683-201ENST00000579659 81 ntBASIC17.88■□□□□ 0.45
APPP05067 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.88■□□□□ 0.45
APPP05067 AC138696.2-201ENST00000607376 223 ntBASIC17.88■□□□□ 0.45
APPP05067 AL033527.4-201ENST00000641026 673 ntBASIC17.88■□□□□ 0.45
APPP05067 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.88■□□□□ 0.45
APPP05067 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
APPP05067 AL138725.1-201ENST00000407347 1314 ntBASIC17.88■□□□□ 0.45
APPP05067 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
APPP05067 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 AP000593.2-201ENST00000542775 1433 ntBASIC17.88■□□□□ 0.45
APPP05067 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.88■□□□□ 0.45
APPP05067 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
APPP05067 REXO1L6P-201ENST00000603433 1515 ntBASIC17.88■□□□□ 0.45
APPP05067 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
APPP05067 AC009093.2-202ENST00000620513 2079 ntBASIC17.87■□□□□ 0.45
APPP05067 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APPP05067 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.87■□□□□ 0.45
APPP05067 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.87■□□□□ 0.45
APPP05067 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APPP05067 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
APPP05067 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APPP05067 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms