Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 AC136621.1-201ENST00000624017 2304 ntBASIC8.91□□□□□ -0.98
APOBP04114 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 AL133467.4-201ENST00000602953 725 ntBASIC8.91□□□□□ -0.98
APOBP04114 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
APOBP04114 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 OR7E12P-201ENST00000344740 973 ntBASIC8.91□□□□□ -0.98
APOBP04114 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC8.91□□□□□ -0.98
APOBP04114 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 RN7SL767P-201ENST00000493013 295 ntBASIC8.91□□□□□ -0.98
APOBP04114 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC8.91□□□□□ -0.98
APOBP04114 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC8.91□□□□□ -0.98
APOBP04114 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 AC008026.2-201ENST00000495438 348 ntBASIC8.91□□□□□ -0.98
APOBP04114 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC8.91□□□□□ -0.98
APOBP04114 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC8.91□□□□□ -0.98
APOBP04114 MIR6893-201ENST00000613458 69 ntBASIC8.91□□□□□ -0.98
APOBP04114 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
APOBP04114 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
APOBP04114 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
APOBP04114 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC8.91□□□□□ -0.98
APOBP04114 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 PSAT1P2-201ENST00000426107 972 ntBASIC8.9□□□□□ -0.98
APOBP04114 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC8.9□□□□□ -0.98
APOBP04114 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC8.9□□□□□ -0.98
APOBP04114 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 TEKT4P2-202ENST00000559466 1312 ntBASIC8.9□□□□□ -0.98
APOBP04114 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 FAU-201ENST00000279259 461 ntTSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
APOBP04114 U73169.1-201ENST00000395152 367 ntBASIC8.9□□□□□ -0.98
APOBP04114 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC8.9□□□□□ -0.98
APOBP04114 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 EEF1DP5-201ENST00000431410 772 ntBASIC8.9□□□□□ -0.98
APOBP04114 MDH2-205ENST00000461263 648 ntTSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC8.9□□□□□ -0.98
APOBP04114 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC8.9□□□□□ -0.98
APOBP04114 AL450487.2-201ENST00000615934 407 ntBASIC8.9□□□□□ -0.98
APOBP04114 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 HYMAI-201ENST00000635591 3347 ntBASIC8.9□□□□□ -0.98
APOBP04114 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.98
APOBP04114 AC064801.2-201ENST00000625052 1303 ntBASIC8.9□□□□□ -0.98
APOBP04114 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
APOBP04114 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms