Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.82□□□□□ -0.52
IFNA1P01562 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IFNA1P01562 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
IFNA1P01562 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
IFNA1P01562 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.81□□□□□ -0.52
IFNA1P01562 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.81□□□□□ -0.52
IFNA1P01562 TSPY19P-201ENST00000418461 509 ntBASIC11.81□□□□□ -0.52
IFNA1P01562 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.81□□□□□ -0.52
IFNA1P01562 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 TSPY18P-201ENST00000441642 509 ntBASIC11.81□□□□□ -0.52
IFNA1P01562 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.81□□□□□ -0.52
IFNA1P01562 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.81□□□□□ -0.52
IFNA1P01562 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.81□□□□□ -0.52
IFNA1P01562 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.81□□□□□ -0.52
IFNA1P01562 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.81□□□□□ -0.52
IFNA1P01562 AC015910.1-201ENST00000579400 975 ntBASIC11.81□□□□□ -0.52
IFNA1P01562 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
IFNA1P01562 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.81□□□□□ -0.52
IFNA1P01562 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
IFNA1P01562 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.81□□□□□ -0.52
IFNA1P01562 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
IFNA1P01562 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.8□□□□□ -0.52
IFNA1P01562 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.8□□□□□ -0.52
IFNA1P01562 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.8□□□□□ -0.52
IFNA1P01562 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.8□□□□□ -0.52
IFNA1P01562 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
IFNA1P01562 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.8□□□□□ -0.52
IFNA1P01562 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.8□□□□□ -0.52
IFNA1P01562 AC105339.3-201ENST00000560043 636 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms