Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LTAP01374 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.23□□□□□ -0.61
LTAP01374 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LTAP01374 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.23□□□□□ -0.61
LTAP01374 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LTAP01374 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LTAP01374 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
LTAP01374 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.23□□□□□ -0.61
LTAP01374 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 AL139385.1-201ENST00000611744 3272 ntBASIC11.22□□□□□ -0.61
LTAP01374 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.22□□□□□ -0.61
LTAP01374 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LTAP01374 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 TUBB3P1-201ENST00000405796 1332 ntBASIC11.22□□□□□ -0.61
LTAP01374 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 AC004832.2-201ENST00000426397 482 ntBASIC11.22□□□□□ -0.61
LTAP01374 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 HTR5BP-201ENST00000430851 1154 ntBASIC11.22□□□□□ -0.61
LTAP01374 AL353779.1-201ENST00000434793 351 ntBASIC11.22□□□□□ -0.61
LTAP01374 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.22□□□□□ -0.61
LTAP01374 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.22□□□□□ -0.61
LTAP01374 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.22□□□□□ -0.61
LTAP01374 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.22□□□□□ -0.61
LTAP01374 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.22□□□□□ -0.61
LTAP01374 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.22□□□□□ -0.61
LTAP01374 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.22□□□□□ -0.61
LTAP01374 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.22□□□□□ -0.61
LTAP01374 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LTAP01374 AC004241.5-201ENST00000623870 2448 ntBASIC11.22□□□□□ -0.61
LTAP01374 AC011498.7-201ENST00000624986 2027 ntBASIC11.22□□□□□ -0.61
LTAP01374 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.22□□□□□ -0.61
LTAP01374 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LTAP01374 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.21□□□□□ -0.61
LTAP01374 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms