Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CTNND1O60716 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 AC078991.1-201ENST00000437297 610 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.26■□□□□ 0.35
CTNND1O60716 PHBP15-201ENST00000574228 665 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 MIR3677-201ENST00000578964 60 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.26■□□□□ 0.35
CTNND1O60716 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 AC087045.2-201ENST00000606279 1003 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 AC092171.5-201ENST00000608012 942 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 AC126177.1-201ENST00000547829 2218 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTNND1O60716 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.26■□□□□ 0.35
CTNND1O60716 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
CTNND1O60716 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTNND1O60716 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 SSR4P1-203ENST00000599569 2260 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.25■□□□□ 0.35
CTNND1O60716 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.25■□□□□ 0.35
CTNND1O60716 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CTNND1O60716 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 KRT18P36-201ENST00000411618 1276 ntBASIC17.25■□□□□ 0.35
CTNND1O60716 AL592076.1-201ENST00000424448 303 ntBASIC17.25■□□□□ 0.35
CTNND1O60716 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.25■□□□□ 0.35
CTNND1O60716 RPL8P2-201ENST00000430538 502 ntBASIC17.25■□□□□ 0.35
CTNND1O60716 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CTNND1O60716 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.25■□□□□ 0.35
CTNND1O60716 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.25■□□□□ 0.35
CTNND1O60716 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.25■□□□□ 0.35
CTNND1O60716 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.25■□□□□ 0.35
CTNND1O60716 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 CAP2P1-201ENST00000557743 1390 ntBASIC17.25■□□□□ 0.35
CTNND1O60716 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CTNND1O60716 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.25■□□□□ 0.35
CTNND1O60716 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CTNND1O60716 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTNND1O60716 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTNND1O60716 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CTNND1O60716 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.24■□□□□ 0.35
CTNND1O60716 AC018629.1-201ENST00000623381 1736 ntBASIC17.24■□□□□ 0.35
CTNND1O60716 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CTNND1O60716 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.24■□□□□ 0.35
CTNND1O60716 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CTNND1O60716 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 RPSAP31-201ENST00000416648 895 ntBASIC17.24■□□□□ 0.35
CTNND1O60716 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CTNND1O60716 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.24■□□□□ 0.35
CTNND1O60716 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.24■□□□□ 0.35
CTNND1O60716 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms