Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.72■□□□□ 0.27
SORBS3O60504 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.72■□□□□ 0.27
SORBS3O60504 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SORBS3O60504 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SORBS3O60504 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.72■□□□□ 0.27
SORBS3O60504 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.72■□□□□ 0.27
SORBS3O60504 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SORBS3O60504 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 TUBBP5-203ENST00000508529 1334 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.71■□□□□ 0.27
SORBS3O60504 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 TNRC18P2-201ENST00000417666 2714 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.71■□□□□ 0.27
SORBS3O60504 AC136759.1-202ENST00000530858 2194 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.71■□□□□ 0.27
SORBS3O60504 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 MIR769-201ENST00000390225 118 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.71■□□□□ 0.27
SORBS3O60504 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.71■□□□□ 0.27
SORBS3O60504 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.71■□□□□ 0.27
SORBS3O60504 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 CHMP4BP1-201ENST00000556017 588 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 AC105129.2-201ENST00000559536 390 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SORBS3O60504 AL645939.5-201ENST00000606834 243 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 AC026740.1-201ENST00000607068 791 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 AL023803.2-201ENST00000620080 638 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SORBS3O60504 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.71■□□□□ 0.27
SORBS3O60504 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 PCDHA3-202ENST00000532566 4594 ntBASIC16.71■□□□□ 0.27
SORBS3O60504 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SORBS3O60504 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.71■□□□□ 0.27
SORBS3O60504 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SORBS3O60504 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SORBS3O60504 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SORBS3O60504 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SORBS3O60504 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 AC099063.4-201ENST00000641099 1602 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 AC007292.2-201ENST00000593524 1812 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SORBS3O60504 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.7■□□□□ 0.26
SORBS3O60504 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.7■□□□□ 0.26
SORBS3O60504 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 AC008132.1-202ENST00000342005 1389 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SORBS3O60504 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.7■□□□□ 0.26
SORBS3O60504 AL662890.1-201ENST00000396818 632 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 AC010141.1-201ENST00000411585 623 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 Z97180.1-201ENST00000445173 988 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.7■□□□□ 0.26
SORBS3O60504 RNA5SP423-201ENST00000517127 109 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SORBS3O60504 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.7■□□□□ 0.26
SORBS3O60504 RN7SL163P-201ENST00000583100 276 ntBASIC16.7■□□□□ 0.26
SORBS3O60504 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SORBS3O60504 AC090164.2-201ENST00000611487 516 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms