Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 AL136379.1-201ENST00000623471 2642 ntBASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRGV1A0A0A0MS02 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 FAM45BP-202ENST00000592932 1624 ntBASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 AL162726.2-201ENST00000438986 1017 ntBASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 AC114812.1-204ENST00000449669 728 ntBASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 ELK1P1-201ENST00000485699 580 ntBASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 AC022616.1-201ENST00000518688 554 ntBASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 AC190387.1-201ENST00000551683 408 ntBASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.87□□□□□ -0.67
TRGV1A0A0A0MS02 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 KRT8P14-201ENST00000414254 1442 ntBASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
TRGV1A0A0A0MS02 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms