Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 RN7SL832P-201ENST00000607781 1756 ntBASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D4Q9Y2X8 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 AC105206.1-202ENST00000314927 2368 ntBASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MIR574-201ENST00000385209 96 ntBASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 AL138828.2-201ENST00000615812 383 ntBASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 AL158212.4-201ENST00000624062 1286 ntBASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 MYADML-201ENST00000474610 2147 ntBASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
UBE2D4Q9Y2X8 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC10.4□□□□□ -0.75
UBE2D4Q9Y2X8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.4□□□□□ -0.75
UBE2D4Q9Y2X8 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.4□□□□□ -0.75
UBE2D4Q9Y2X8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
UBE2D4Q9Y2X8 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
UBE2D4Q9Y2X8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.39□□□□□ -0.75
UBE2D4Q9Y2X8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms