Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 GPR53P-205ENST00000457298 1084 ntBASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 AP000812.2-201ENST00000538934 718 ntBASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 AL512343.1-201ENST00000605837 169 ntBASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
PPARGC1AQ9UBK2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 CD8B2-202ENST00000417670 633 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 POM121L8P-201ENST00000417732 1281 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AC234783.1-201ENST00000441761 496 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 POM121L9P-203ENST00000441984 1285 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 CROCCP4-201ENST00000457096 498 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 ACA64.2-201ENST00000459014 129 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 RNA5SP486-201ENST00000515961 83 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 KRT90P-201ENST00000549264 1064 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 AC005840.4-201ENST00000541242 2494 ntBASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PPARGC1AQ9UBK2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.55■□□□□ 0.08
PPARGC1AQ9UBK2 RPL7P3-201ENST00000441388 714 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms