Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CALYQ9NYX4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.35□□□□□ -0.43
CALYQ9NYX4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.35□□□□□ -0.43
CALYQ9NYX4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CALYQ9NYX4 AL138725.1-201ENST00000407347 1314 ntBASIC12.35□□□□□ -0.43
CALYQ9NYX4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CALYQ9NYX4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.35□□□□□ -0.43
CALYQ9NYX4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CALYQ9NYX4 AC092135.3-201ENST00000624151 1846 ntBASIC12.34□□□□□ -0.43
CALYQ9NYX4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AP001889.1-201ENST00000525414 633 ntBASIC12.34□□□□□ -0.43
CALYQ9NYX4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AC015936.2-201ENST00000593177 259 ntBASIC12.34□□□□□ -0.43
CALYQ9NYX4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AL358472.5-202ENST00000641448 1267 ntBASIC12.34□□□□□ -0.43
CALYQ9NYX4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AC015802.1-201ENST00000588104 1449 ntBASIC12.34□□□□□ -0.43
CALYQ9NYX4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CALYQ9NYX4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CALYQ9NYX4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CALYQ9NYX4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 AL138709.1-201ENST00000614840 1693 ntBASIC12.33□□□□□ -0.44
CALYQ9NYX4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 TPM3P8-201ENST00000330554 643 ntBASIC12.33□□□□□ -0.44
CALYQ9NYX4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 POM121L8P-201ENST00000417732 1281 ntBASIC12.33□□□□□ -0.44
CALYQ9NYX4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CALYQ9NYX4 POM121L9P-203ENST00000441984 1285 ntBASIC12.33□□□□□ -0.44
CALYQ9NYX4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CALYQ9NYX4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms