Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 KLF2P4-201ENST00000451959 1225 ntBASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 FTH1P14-201ENST00000482930 551 ntBASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PARPBPQ9NWS1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.4□□□□□ -0.27
PARPBPQ9NWS1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 AC112492.5-201ENST00000421897 457 ntBASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 U91328.1-201ENST00000437528 223 ntBASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 AL512343.1-201ENST00000605837 169 ntBASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 AC017083.2-201ENST00000608069 979 ntBASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 PEG13-201ENST00000631594 5667 ntBASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.39□□□□□ -0.27
PARPBPQ9NWS1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PARPBPQ9NWS1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms